PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019162287.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 236aa    MW: 26897 Da    PI: 4.9634
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019162287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62.1e-2079129255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd      k +r++lg+f+taeeAa a+++a+++++g
  XP_019162287.1  79 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFDTAEEAAMAYDKAALRIRG 129
                     7********.**********3...2234*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MGSVEREQES ASSDAILENV WANFIAKNES KESQYEYENW DGILHRLPSL EELQTSINGG  60
PKSSPERVKV EKEVVRRRHY RGVRRRPWGK YAAEIRDSSR KGARVWLGTF DTAEEAAMAY  120
DKAALRIRGP KAYLNFPLQS TVDDARGTCC NQNELSSANC SFIGSCFGYG EITCDSRKRV  180
SREWDIFEDS SCMITQPAQK MQPQTRLEET LETSFTDVVE FQDLGSDYLE HLLLIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.15e-17ERF family protein