PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019162697.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 809aa MW: 86900.2 Da PI: 6.0085

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019162697.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.6	6.5e-14	318	379	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e+e kr r+++NRe+A+ sRqRKk ++eeLe+kv ++ + ++L ++++ + e +l+++ XP_019162697.1 318 EEEEKRKTRLMRNRESAQLSRQRKKHYVEELEDKVRTMHSTIQDLNSKISYIMAENVSLRQQ 379 6899**********************************************999999888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 809 aa Download sequence
MAKTAVAEPP TPPSNLNLTT ATGAADGLED VLPISPLEAA HMFQNDDVVM DDFDFPFDFS 60 FDDFCLPFGA DNSLSQNFLP VSLDQAGCDP VQAQLDVGPT CYVQPGSGCE PIGAFKNSAS 120 IFKSSSSELC HFSADQIAGD AMLLNSVSPE LSSSSSRVLV VNSPESQQIY GDVSGYLNVP 180 SPESNGSNRE ASQRSGNENQ GSSGDVVLNC PSPESEGSGN CGPNVSAAPD LLSTDSDKSV 240 NSSTDFGNNS IKIGVVDQKI KLEELNANIN NCSNSMLKRK KQAEDTNNVE SRSSKYRKPV 300 DDTNTENNSE NNDNITIEEE EKRKTRLMRN RESAQLSRQR KKHYVEELED KVRTMHSTIQ 360 DLNSKISYIM AENVSLRQQM GGNGVAVAPP MPPPGMYPPV MYPWMPCAPP YMVKPQGSQV 420 PLVPIPRLKP QQTVSAPKSS KKVESKKNEP KTKKVASVTF LGLLFFILVV GGLVPTVNVR 480 YGGIREAFTG NTRSGYYEKH PARVLAVNRT GQGESSAHGK HSSDVTHFGV QGHGGGGGKQ 540 HSEQDADEFG QSGNGSVPLA ASLYVPRNDK LVKIDGNLII HSVLASEKAM ASHVSAEEKV 600 SQETGLAVPE NMAPAITAGR HPHMYQGAAE RQRALGSDSM GKDNMRSTGA DGRLQQWFRE 660 GLAGPMLSSG MCSEVFQFDV SSAIVPATSM RDVSLEETRN STKSKKGRNR RILNGLSVPL 720 SATSHNISEE TAEISGNKEK LKGNNNSLSS MVVSVLVDPR EGGDGDVDGV MGKKSLSRIF 780 VVVLVDSVKY VTYSCMLPFK GSVPHLVTT

Sequence ? help Back to Top

Protein Sequence Length: 809 aa Download sequence

MAKTAVAEPP TPPSNLNLTT ATGAADGLED VLPISPLEAA HMFQNDDVVM DDFDFPFDFS  60
FDDFCLPFGA DNSLSQNFLP VSLDQAGCDP VQAQLDVGPT CYVQPGSGCE PIGAFKNSAS  120
IFKSSSSELC HFSADQIAGD AMLLNSVSPE LSSSSSRVLV VNSPESQQIY GDVSGYLNVP  180
SPESNGSNRE ASQRSGNENQ GSSGDVVLNC PSPESEGSGN CGPNVSAAPD LLSTDSDKSV  240
NSSTDFGNNS IKIGVVDQKI KLEELNANIN NCSNSMLKRK KQAEDTNNVE SRSSKYRKPV  300
DDTNTENNSE NNDNITIEEE EKRKTRLMRN RESAQLSRQR KKHYVEELED KVRTMHSTIQ  360
DLNSKISYIM AENVSLRQQM GGNGVAVAPP MPPPGMYPPV MYPWMPCAPP YMVKPQGSQV  420
PLVPIPRLKP QQTVSAPKSS KKVESKKNEP KTKKVASVTF LGLLFFILVV GGLVPTVNVR  480
YGGIREAFTG NTRSGYYEKH PARVLAVNRT GQGESSAHGK HSSDVTHFGV QGHGGGGGKQ  540
HSEQDADEFG QSGNGSVPLA ASLYVPRNDK LVKIDGNLII HSVLASEKAM ASHVSAEEKV  600
SQETGLAVPE NMAPAITAGR HPHMYQGAAE RQRALGSDSM GKDNMRSTGA DGRLQQWFRE  660
GLAGPMLSSG MCSEVFQFDV SSAIVPATSM RDVSLEETRN STKSKKGRNR RILNGLSVPL  720
SATSHNISEE TAEISGNKEK LKGNNNSLSS MVVSVLVDPR EGGDGDVDGV MGKKSLSRIF  780
VVVLVDSVKY VTYSCMLPFK GSVPHLVTT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	699	711	RNSTKSKKGRNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	1e-137	bZIP family protein