PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019162926.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 262aa    MW: 28090.7 Da    PI: 10.0769
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019162926.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.6e-202675255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a+++a+++++g
  XP_019162926.1 26 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDKAAREFRG 75
                    69*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MAPKEKGTAM AVAAAKLHDI RKEQVHFRGV RKRPWGRYAA EIRDPGKKSR VWLGTFDTAE  60
EAARAYDKAA REFRGSKAKT NFPVPEDLLP INFATQLRVV KNSVCEKNAG GNGQSPSPSS  120
TVESSSRDGG GGGRISPAVM ADSSPLDLSL GGRAPVMFPI PNPHRVVPHM VPGAYPAGVY  180
PVSQLVYLNA LARAVAVNPP LNRQAETLNF FATNANFGDH SESDSSSVID LNVGYREPRK  240
VGPINNFDLN HPPPESLGTG AL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.14e-29ERF family protein