PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019163104.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 177aa    MW: 19724.5 Da    PI: 7.6359
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019163104.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-19755254
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54
                    +y+GVr+++ +g+Wv+eIr+p     + +r++lg+f tae+Aa+a+++a++ + 
  XP_019163104.1  7 RYRGVRQRH-WGSWVSEIRHPL----SkTRVWLGTFETAEDAARAYDEAARLMC 55
                    69******9.**********73....35**********************8775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MARPQQRYRG VRQRHWGSWV SEIRHPLSKT RVWLGTFETA EDAARAYDEA ARLMCGPRAK  60
TNFPYNPNAP LSSSSKLLSA TLTAKLHKCY MASLQMIKTS PPPQHPPPHP SSATAAPPLV  120
AAAQPPPADW AVKTEGVLEM GNTTEFIKPL EDDHIEQMIE ELLDYGSFEL SSVMHCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.14e-52ERF family protein