PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019163297.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 480aa MW: 52649.9 Da PI: 7.4116

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019163297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.7	8e-11	173	214	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ L++ ++L XP_019163297.1 173 AKTLRRLAQNREAARKSRLRKKAYVQQLETSRIRLSQLEQEL 214 5889*************************8665555555544 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MAASQRVGET GVSGTSSQHH HNMPYELLRG LNNPTTTPSF MYHSTSNKEG PAAFDFGELE 60 EAIVLQGVNN DEAKASLYAA ATLEMFPSWP TRSPLHTPRG SSRSGGEESG DSGRAEGPDS 120 PISTRPSSHL SLPSTQNHQP QIMATTTSAA SKQPTTHDKR RGAGSTSDRV LDAKTLRRLA 180 QNREAARKSR LRKKAYVQQL ETSRIRLSQL EQELHSARSQ GVFLGGGGAV GAGTSSGGAI 240 FDMEYARWLD DDHRHISELR TALQAHLSDG ELRVVVDGYI GHYDEIFRLK GEAAKSDVFH 300 LITGMWTTPA ERCFLWMGGF RPSELIKMLT GKLDPLTEQQ VVGIYGLQHS SQQAEEALTQ 360 GLDQLQQSLV ETIAVGSAAA DGGVHHMAMA IGKLANLEGF VRQADNLRQQ TLHQLHRILT 420 VRQAARCFLM IGEYYNRLRA LSSLWASRPR ETMIAGDDSS CQTTTHLQMV QFSQSHFSNF

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MAASQRVGET GVSGTSSQHH HNMPYELLRG LNNPTTTPSF MYHSTSNKEG PAAFDFGELE  60
EAIVLQGVNN DEAKASLYAA ATLEMFPSWP TRSPLHTPRG SSRSGGEESG DSGRAEGPDS  120
PISTRPSSHL SLPSTQNHQP QIMATTTSAA SKQPTTHDKR RGAGSTSDRV LDAKTLRRLA  180
QNREAARKSR LRKKAYVQQL ETSRIRLSQL EQELHSARSQ GVFLGGGGAV GAGTSSGGAI  240
FDMEYARWLD DDHRHISELR TALQAHLSDG ELRVVVDGYI GHYDEIFRLK GEAAKSDVFH  300
LITGMWTTPA ERCFLWMGGF RPSELIKMLT GKLDPLTEQQ VVGIYGLQHS SQQAEEALTQ  360
GLDQLQQSLV ETIAVGSAAA DGGVHHMAMA IGKLANLEGF VRQADNLRQQ TLHQLHRILT  420
VRQAARCFLM IGEYYNRLRA LSSLWASRPR ETMIAGDDSS CQTTTHLQMV QFSQSHFSNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	0.0	bZIP family protein