PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019163534.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 128aa    MW: 14235.5 Da    PI: 10.6246
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019163534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.27.4e-17958255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y GVr++k +g+Wv+eIr p     + kr +lg++ tae Aa a++ a  +l+ 
  XP_019163534.1  9 KYLGVRRRK-WGKWVSEIRIPA----TqKRLWLGTYATAEAAAVAHDVAYICLRE 58
                    899***998.**********84....25***********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MKSKEVKRKY LGVRRRKWGK WVSEIRIPAT QKRLWLGTYA TAEAAAVAHD VAYICLREPT  60
TLDKLNFPAA TLRLTAGVRR GMSPVSVQKA ASDAGMAVDA TTKFKENSVG EKPNFFMGIE  120
GAYWGNNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.12e-28ERF family protein