PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019163549.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 291aa    MW: 33167.3 Da    PI: 5.4772
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019163549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM583.2e-1871403128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkklel.eevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 
                      Gf F+Ptd+el+ +yL++ v gk+l+  +++++  ++y   eP+++    + +    y+F++ ++k ++g+r  r + ++g+Wk + + k++++
  XP_019163549.1   7 HGFIFKPTDKELL-QYLEAFVLGKPLKHtSDFFALEHLYGgKEPSEIF--GSDGPMTRYYFTELKRKCEHGSRFLRtVGDRGTWKGQDRGKPIKV 98 
                     69***********.9**********666145577667775269****6..23345588******************56669****9988888887 PP

             NAM  95 k..kgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                        k++++g kk+L +       kg a + +   W+m+ey+l
  XP_019163549.1  99 GdeKKTVMGFKKSLRYEakkpksKGGADERRGEVWLMKEYSL 140
                     64477779********976666556666666788******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MALRSLHGFI FKPTDKELLQ YLEAFVLGKP LKHTSDFFAL EHLYGGKEPS EIFGSDGPMT  60
RYYFTELKRK CEHGSRFLRT VGDRGTWKGQ DRGKPIKVGD EKKTVMGFKK SLRYEAKKPK  120
SKGGADERRG EVWLMKEYSL SDDYLRDKNV VPKDVVLCRI KRVLRNTSRS HELSTQNFNE  180
NDTPLEIYNW PENDNVMVSL PPSETSNLAR EDFNGVDAYG GVSAMGSGFD DPYPEVSAMG  240
NDLLLDELDE LLRKTPPHDI FDDDNFWSDI LAPENNERID HPGPVPIGPF N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.13e-13NAC family protein