PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019163550.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 292aa    MW: 33189.4 Da    PI: 6.2729
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019163550.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.59.4e-1871413128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkklel.eevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 
                      Gf F+Ptd+el+ +yL++ v gk+l+  +++++  ++y   eP+++    + +    y+F++ ++k ++g+r  r + ++g+Wk +   +++ +
  XP_019163550.1   7 HGFIFKPTDKELL-QYLEAYVLGKPLKHtSDFFALEHLYGgKEPSEIF-G-SDSPMTRYYFTELKRKCEHGSRFLRtVGDRGTWKGQDAGQPIRV 98 
                     69***********.9**********666145577667775269****6.2.2334578******************56669****9988888887 PP

             NAM  95 k..kgelvglkktLvfy.......kgrapkgektdWvmheyrl 128
                        +++++g kk+L +         g a + +   W+m+ey+l
  XP_019163550.1  99 GkeTKTVMGFKKSLRYEakkskskGGGADERRGEVWLMKEYSL 141
                     54466679********9654444223444445678******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MALRSLHGFI FKPTDKELLQ YLEAYVLGKP LKHTSDFFAL EHLYGGKEPS EIFGSDSPMT  60
RYYFTELKRK CEHGSRFLRT VGDRGTWKGQ DAGQPIRVGK ETKTVMGFKK SLRYEAKKSK  120
SKGGGADERR GEVWLMKEYS LSDDYLRDKK VVRKDVVLCR IKRVLRNTSR SRELSTQNFN  180
ENDTPLEIYN WPKNDNVMVS LPPSETSNLA REDFNGVDAY GGVNAMGSGV DDAYPEVSAM  240
GNDLLLDELD ELLRKTPPHD IVDDDNFWSD ILAPDNNERM DHPGPVPIGP FN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-08NAC family protein