PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019163553.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 294aa MW: 33168.4 Da PI: 6.5452

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019163553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	59.3	1.3e-18	7	140	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 Gf F+Ptd+el+ +yL++ v gk+ ++++++++ d+y eP+++ +++ y+F++ ++k+++g+r r + ++g+Wk + +++ + XP_019163553.1 7 HGFIFKPTDKELL-QYLEAFVLGKPlKHTFDFFAQEDLYGGkEPSEIF--GSGGLMTRYYFTELKRKSERGSRFLRgVGDRGTWKGQDAGQPIRV 98 69*********.9******545568899975496..23455688**************8889*9988888887 PP NAM 95 k..kgelvglkktLvfy......kgrapkgektdWvmheyrl 128 +++++g kk+L + kg a + + W+m+ey+l XP_019163553.1 99 GkeTKTVMGFKKSLRYEakksksKGGADERRGEVWLMKEYSL 140 54466679****976555545556666788****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MALRSLHGFI FKPTDKELLQ YLEAFVLGKP LKHTFDFFAQ EDLYGGKEPS EIFGSGGLMT 60 RYYFTELKRK SERGSRFLRG VGDRGTWKGQ DAGQPIRVGK ETKTVMGFKK SLRYEAKKSK 120 SKGGADERRG EVWLMKEYSL SDDYLRDKNV VLKDVVLCRI KRVFRNTSRS RESSTQNFNE 180 NDTPLEIYNW PENDNVMVSL PPSETSTLPG EVSSGVDDVY GGMSAMGSGV NDAYGGMNAM 240 GNDPLLDDEL DELLRKTPPH DIFGDYNFLS NIPAPKDNER IDHPGPVPIL RPFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-15	NAC family protein