PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019163556.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 292aa    MW: 32782.1 Da    PI: 5.8845
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019163556.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.79.5e-1971403128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkklel.eevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 
                      Gf F+Ptd+el+ +yL++ v gk+l+  +++++  d+y + eP+++    +++    y+F++ ++k+++g+r  r + ++g+Wk +   +++ +
  XP_019163556.1   7 HGFIFKPTDKELL-QYLEAFVLGKPLKHtSDFFSMEDLYGAkEPSEIF--GSGGLMTRYYFTELRRKSERGSRFLRnVGDRGTWKGQDAGQPIRV 98 
                     69***********.9**********66614568888**98769****6..23455688******************7777*****9888888877 PP

             NAM  95 k..kgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                        +++++g kk+L +       kg a + +   W+m+ey+l
  XP_019163556.1  99 GkkTKTVMGFKKSLRYEakksksKGGADERRGEVWLMKEYSL 140
                     53366679********976555545556666788******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MALRSLHGFI FKPTDKELLQ YLEAFVLGKP LKHTSDFFSM EDLYGAKEPS EIFGSGGLMT  60
RYYFTELRRK SERGSRFLRN VGDRGTWKGQ DAGQPIRVGK KTKTVMGFKK SLRYEAKKSK  120
SKGGADERRG EVWLMKEYSL SDDYLRDKNV VPKDVVLCRI KRVLRNTSRS RELSTQNFNE  180
DDTPLEIYNW PENDNVMVSL PLETSTLAGE VSNGVDAYGG VSASAMGSGV DDAYGGVIAV  240
GNDPLLDELD ELLRKTPPQG IFDDYNIWSD ILAPEDNERI DHPGPVPILK AI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-15NAC family protein