PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019163606.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 251aa    MW: 28248.8 Da    PI: 4.8915
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019163606.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY986.3e-3158116259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC++kk+vers++d +v++itY+++Hnh+
  XP_019163606.1  58 SDSWSWRKYGQKPIKGSPHPRGYYRCSSSkGCSAKKQVERSRTDASVLIITYTSTHNHP 116
                     69*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MDNTHQSPAS ELKNSRTLMR PEVQASSSKK RSMAQKVVVT VKLGEGDGRK RKSEGPPSDS  60
WSWRKYGQKP IKGSPHPRGY YRCSSSKGCS AKKQVERSRT DASVLIITYT STHNHPEVRE  120
EPAAAEEEDN PTSTPVPEGG EEEAEEMEHR SGVKDNGYEE DSFHYSQSPF NTTSSEDMII  180
NRADDNYLFT ETLGTTTTTN YDPLSYPHLM DFSTPKSQEE NDFYDELEEL PPTSSFISHT  240
FFKDTISVNS I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.22e-36WRKY family protein