PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019163670.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 236aa    MW: 26544 Da    PI: 6.6007
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019163670.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-172473255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +g+WvAeI+  s   ++ r +lg+f+taeeAa a+++a+  l+g
  XP_019163670.1 24 KFVGVRQRP-SGKWVAEIKNTS---QKIRMWLGTFDTAEEAAMAYDEAACLLRG 73
                    799******.7******99932...36**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MELHFQNHQK EGGVREAAAN KRRKFVGVRQ RPSGKWVAEI KNTSQKIRMW LGTFDTAEEA  60
AMAYDEAACL LRGSNTRTNF INHAPPNPAL SLKIRNLLTQ KKKNLKKTPM ISPSQTPPAS  120
DDSKSFVSVT APDVPVLDNA YKPGFSFSAG GLGHDHSSLM VDFDRFLLAQ SDEVLKGNHE  180
DEISEFEHMK VEREISASMY AMNGVNEYWE NVHEYDCSSD HAFLDLPMLC QMFCST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-42ERF family protein