PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019163678.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 200aa    MW: 21822.3 Da    PI: 4.5055
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019163678.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.3e-181868155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y+GVr +k +g+Wv+eIr+    gk++r++lg+f tae+Aa a++ a+ +l+g
  XP_019163678.1 18 SPYRGVRKRK-WGKWVSEIRET---GKKTRIWLGSFETAEMAAVAYDTAAFYLRG 68
                    68*****999.**********3...457*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MEPNTYNVTN VVVGGVPSPY RGVRKRKWGK WVSEIRETGK KTRIWLGSFE TAEMAAVAYD  60
TAAFYLRGTS ARLNFPQWAR ALPRPRTSGA DDIRAAAREA ALLLKGAMGL EGQREDNAAP  120
LRAGSSSGAS NVPAAAPVNV GLSESEIQAI NDFPLDSSEM WSEMAAGFHV MGDDQSMVLA  180
TSEYEETNYE DQIDDSLWDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.11e-34ERF family protein