PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019164440.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 185aa MW: 20897.5 Da PI: 8.4429

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019164440.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.9	1.2e-29	93	151	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk s++pr+YY+C+s gC+vkk+ver++ed ++++ tYeg Hnhe XP_019164440.1 93 LDDGFKWRKYGKKMVKTSPNPRNYYKCSSGGCSVKKRVERDREDSRYIIATYEGVHNHE 151 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MENSQFQNPD NAGVLFVDAP EYYLSDYLLP ENISPAAEQH CWPKTMVPTE SVGSGSSNPI 60 PTSSNMANNG TKKKVQRAKC RIAFRIKTEL ETLDDGFKWR KYGKKMVKTS PNPRNYYKCS 120 SGGCSVKKRV ERDREDSRYI IATYEGVHNH ESPCVLYYTN EMYTTLPIEA HGWALQPSSL 180 PSSSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	2e-41	WRKY family protein