PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019164547.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 482aa MW: 52670.3 Da PI: 6.1466

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019164547.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.1	5.1e-10	194	235	5	46
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k rr+++NReAAr+sR+RKka++++Le+ L++ ++Lk XP_019164547.1 194 KTLRRLAQNREAARKSRLRKKAYVQQLETSRLRLTQLEQELK 235 6789************************98777777776666 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MQSFKASVIP PVSLPNSSDM YCNSAFYLRG DEGGRNGGGR FLDIGELDNS APFHQEDAVD 60 LTRSSIYNEM RLSNASIVSP NSLHFADINT SIGSTEMGSS ETGVDAGRFM MQRGGATALM 120 GGRVLGGGGG GGLGNGSFEN WGESGGTAEH SQQTDTSTDV DTEEKIQSLG VQHGSVLVVD 180 SMEQSKGGRL GEPKTLRRLA QNREAARKSR LRKKAYVQQL ETSRLRLTQL EQELKQARQQ 240 GAFVANGFVG DKSPSTTIGN GALAFDMEYA RWLEEHQRLT NDLRSAVNCL VGDNELRLLV 300 DGVMSHYDEI FRLKSMGAKS DVFHMLSGMW LTPAERCFMW LGGFRSSELL KILGNHLEPL 360 TEQQLVGICN LQQSSQQAED ALSQGMEALQ QLLVETLSST SLGPNGSGNV TDYMGQMAIA 420 MGKLATIENF LHQADLLRQQ TLHQLHRILT TRQAARALLA INDYMSRLRA LSSLWLARPR 480 DC

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MQSFKASVIP PVSLPNSSDM YCNSAFYLRG DEGGRNGGGR FLDIGELDNS APFHQEDAVD  60
LTRSSIYNEM RLSNASIVSP NSLHFADINT SIGSTEMGSS ETGVDAGRFM MQRGGATALM  120
GGRVLGGGGG GGLGNGSFEN WGESGGTAEH SQQTDTSTDV DTEEKIQSLG VQHGSVLVVD  180
SMEQSKGGRL GEPKTLRRLA QNREAARKSR LRKKAYVQQL ETSRLRLTQL EQELKQARQQ  240
GAFVANGFVG DKSPSTTIGN GALAFDMEYA RWLEEHQRLT NDLRSAVNCL VGDNELRLLV  300
DGVMSHYDEI FRLKSMGAKS DVFHMLSGMW LTPAERCFMW LGGFRSSELL KILGNHLEPL  360
TEQQLVGICN LQQSSQQAED ALSQGMEALQ QLLVETLSST SLGPNGSGNV TDYMGQMAIA  420
MGKLATIENF LHQADLLRQQ TLHQLHRILT TRQAARALLA INDYMSRLRA LSSLWLARPR  480
DC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	39	GGRNGGG
2	121	127	GGRNGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-132	bZIP family protein