PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019164591.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 222aa MW: 25010.9 Da PI: 9.4625

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019164591.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	104.5	6.1e-33	32	88	5	61
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++cprC+s++tkfCy+nnys++qPry+C++C+ryWt+GG lr++P+Gg + k +ks XP_019164591.1 32 PRECPRCHSNDTKFCYFNNYSMNQPRYYCRTCKRYWTHGGILRDIPIGGKSHKGRKS 88 689***********************************************9998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MEQGNGVGDY HPPLPPVRRL RTMESLGSPP PPRECPRCHS NDTKFCYFNN YSMNQPRYYC 60 RTCKRYWTHG GILRDIPIGG KSHKGRKSTG RYENKRVQPS SPQLQPSCPR ANVAPVTFGP 120 LALPPTVTPY RVENGYLNMV NPMRIIEPPY NSSQYAFQPT TRDYGQNFFL NNNDGASSSN 180 SFPLNASVGS RTTDGYTNFG WGSLIANPND WLDFSRSFDP ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21050.1	8e-26	Dof family protein