PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019164592.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 230aa MW: 26191.1 Da PI: 9.4762

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019164592.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	93.2	2e-29	35	90	4	59
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 ++cprC+s++tkfCy+nny+++qPry+C++C+r+Wt+GG r++P+Gg + + XP_019164592.1 35 PPRQCPRCHSNDTKFCYFNNYNMNQPRYYCRTCKRHWTHGGIQRDIPIGGKPHRGR 90 5689*********************************************9866655 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MEQSNGVGDY HLPLPPPPPP PRRLRTTEYH GSPPPPRQCP RCHSNDTKFC YFNNYNMNQP 60 RYYCRTCKRH WTHGGIQRDI PIGGKPHRGR KFTNRYENRR VQPSPPQLQP SCPRANVAPV 120 TFGPLAIPST VTPYRVENGY LNMVNPLRTI EPPYNSSQNA FQPTTRDYGS RTQNFFLNNN 180 DGASSSNSIP LNVSVYSDTT VGRYTNDGWS SLVVNPNDWL DFSHSFDPPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21050.1	5e-23	Dof family protein