PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019164614.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 302aa    MW: 33522.3 Da    PI: 5.7907
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019164614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.87.4e-1582127453
             AP2   4 kGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 
                     +GVr +k +g+W AeIr p        +r++lg+f+++eeA +a+  +++++
  XP_019164614.1  82 PGVRKRK-WGKWCAEIRNP-----LvgRRVWLGTFDSPEEASRAYFSMKEEF 127
                     7***999.**********7.....334******************9888775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MVEGETRGLR KVTILVSDPD PYATESSSDE SDRETRQKRV VGEVFIPHSA AVAAPLTQPE  60
KDPVAVPVQE IGSGSGQKKK WPGVRKRKWG KWCAEIRNPL VGRRVWLGTF DSPEEASRAY  120
FSMKEEFDKI ARAKQGTKSN KTATILPVGV QVSKKTGKFY SELPNPTGNR KTRLGPFKTA  180
EEASQAYQSK KHEFEESKKH ELKESKVSQC EESEVIGDVQ SSDHSCSNGG GGEEDGDRWL  240
GQWVSMPDGS EVSFSVKYGI PIIDNYGMFL GEFRRLDDDL WICGPGDDDN QPSHPEFPGN  300
PN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-19ERF family protein