PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019164629.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 243aa MW: 27868.6 Da PI: 4.802

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019164629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	126.1	2.9e-39	7	135	3	127
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +GfrF Pt+eelv++yLk+k++g++ +++ vi+ v+iy++ PwdLp+ + + +ew+fF+ +++ ++g r+nr t +gyWka+g + + XP_019164629.1 7 QGFRFFPTEEELVCFYLKHKLQGDREDIDAVIPVVNIYDHCPWDLPRlvgelCRGDDPEEWFFFVDMQENISRGGRPNRLTPEGYWKASGIPTLM 101 7*************************999***********6456543333556****************************9999 PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyr 127 +s ++e +gl++t++fy+grap+g+kt+W m ey+ XP_019164629.1 102 YS-NNEIIGLRRTMIFYRGRAPTGRKTEWKMIEYK 135 99.999**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MEDNCLQGFR FFPTEEELVC FYLKHKLQGD REDIDAVIPV VNIYDHCPWD LPRLVGELCR 60 GDDPEEWFFF VDMQENISRG GRPNRLTPEG YWKASGIPTL MYSNNEIIGL RRTMIFYRGR 120 APTGRKTEWK MIEYKAILGQ PPPTATISDV QLRHEFSLCR IYKTARLDRG FDRRPPAPAA 180 IAVPRAAEPP SPHLQTVPEA IAAQPSSSHP QAVPESVEDS SSLQNNFWDD VCVPLWDWEG 240 MDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44350.2	2e-58	NAC family protein