PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019164654.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 170aa MW: 19754.2 Da PI: 8.7968

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019164654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45	2.3e-14	85	140	5	60
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +r+rr+++NRe+ArrsR RK+ ++eL v L +eN+ L ++l++ ++ +k XP_019164654.1 85 RRQRRMISNRESARRSRMRKQRHLDELWSQVVRLRSENHGLLDKLNQASERHDKAV 140 79****************************************88888877766655 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MIPSETMGIT YLSAENSSHL PLDITFMHNT FHFSRFLTCN NLPNNFHTSL HPAVPELAQN 60 PSCFGNNSTS DESSDKTQLR IMNERRQRRM ISNRESARRS RMRKQRHLDE LWSQVVRLRS 120 ENHGLLDKLN QASERHDKAV QENARLKEEA ADLRRMLAEA QLPAGWPDFQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	105	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	2e-41	bZIP family protein