PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019165105.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 167aa MW: 19139.6 Da PI: 6.5097

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019165105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.1	8.1e-13	30	88	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+++NRe+ArrsR RK++ ++ L v L +eN++ + ++ ++++ ++++e+ XP_019165105.1 30 RKRKRMISNRESARRSRMRKQKHLDDLVFQVGHLRKENSQIITSMSITTQHYLNVEAEN 88 6789***********************************99998888888887777666 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MASSSGTCSG SSMMQNSGSE GDLQELMDQR KRKRMISNRE SARRSRMRKQ KHLDDLVFQV 60 GHLRKENSQI ITSMSITTQH YLNVEAENSI LRAQMDELSH RLQSLNEMIS FLNGNNWGSE 120 IDQQPYLYST VLNETLDDGF FMNNSCWNFV CVNKPIMATA PADMLQY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	51	RKRKRMISNRESARRSRMRKQK
2	43	50	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	6e-49	bZIP family protein