PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019165185.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

DBB

Protein Properties

Length: 198aa MW: 21897.3 Da PI: 6.1043

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019165185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.3	3.3e-08	4	35	5	36
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg 36 C+ +e++e+++fC ++ lC++C + H+ XP_019165185.1 4 QCDVCEKEEASFFCSADEAALCRSCDHQVHHA 35 7***************************9743 PP
2	zf-B_box	25.2	3.4e-08	57	94	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + C+ ++e ++ lfC++++ lC+dC l Hk Ht XP_019165185.1 57 SQHCDICQERRALLFCKEDRAILCRDCDLRMHKAneHT 94 578*****************************877875 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MKIQCDVCEK EEASFFCSAD EAALCRSCDH QVHHANKLAT KHLRFSLIHP ASSAESSQHC 60 DICQERRALL FCKEDRAILC RDCDLRMHKA NEHTQKHSRF LLTGVKLSSF DVPNQLASSS 120 ESSAVSYTTP ATMAGSPTSS QAIYETSSNP QVVDGQQTSQ EGAVSATSSI SEYLLETLPG 180 WHVQDFLDYP SSSTTYHF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	4e-72	DBB family protein