PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165192.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 119aa    MW: 13395.1 Da    PI: 6.6977
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.4e-201363255
             AP2  2 gykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +g++ +eIrd  + ng   r++lg+++taeeAa+a+++a+ +++g
  XP_019165192.1 13 KYRGVRKRP-WGKYGVEIRDS-NrNG--VRVWLGTYDTAEEAARAYDRAAYEMRG 63
                    8********.**********4.4254..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MEEARRKNSE EVKYRGVRKR PWGKYGVEIR DSNRNGVRVW LGTYDTAEEA ARAYDRAAYE  60
MRGKFAVLNF PGEYPSTLNG SCSPATPPVG KGFVEKGTAK EVIEFECLDD KLLEELLAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.11e-21ERF family protein