PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019165311.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 356aa MW: 39994.2 Da PI: 8.8923

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019165311.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.9	9.5e-33	229	284	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGG+++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_019165311.1 229 KQRRCWSPELHKRFINALQQLGGPQVATPKQIRELMQVEGLTNDEVKSHLQKYRLH 284 79****************************************************97 PP
2	Myb_DNA-binding	50	6.8e-16	231	282	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e+++++++a +qlGg+ t+k I + m+ +g+t ++ks++qky+ XP_019165311.1 231 RRCWSPELHKRFINALQQLGGPqvaTPKQIRELMQvEGLTNDEVKSHLQKYR 282 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MDFISPLESR PPVVLRTITE FLREISMIGN VSEKVERIDD RVRRLEDEMR KIDAFKRELP 60 LCMVLLNDVI IVLKEESKKC RKSLVEPVFE EFLPLKKSSG DDDLDRHYKV DTNKEDSKEK 120 INWSAEGEGN SSVANDFPVS FKRRNINKAF VPFKGCSGFP VKVVRKDHQE ELAGEPGLSL 180 STPGITNRRE DMVIGDFSSK PSRVVPSSAS STVTNIKARA QPQQQTSRKQ RRCWSPELHK 240 RFINALQQLG GPQVATPKQI RELMQVEGLT NDEVKSHLQK YRLHTRRIPT TQSSPANKSI 300 VVLGNLFTVD QYGESSKQSS SQSGSPQGTL QLAASSRGTS MTGSDSMEED GDDRSE

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MDFISPLESR PPVVLRTITE FLREISMIGN VSEKVERIDD RVRRLEDEMR KIDAFKRELP  60
LCMVLLNDVI IVLKEESKKC RKSLVEPVFE EFLPLKKSSG DDDLDRHYKV DTNKEDSKEK  120
INWSAEGEGN SSVANDFPVS FKRRNINKAF VPFKGCSGFP VKVVRKDHQE ELAGEPGLSL  180
STPGITNRRE DMVIGDFSSK PSRVVPSSAS STVTNIKARA QPQQQTSRKQ RRCWSPELHK  240
RFINALQQLG GPQVATPKQI RELMQVEGLT NDEVKSHLQK YRLHTRRIPT TQSSPANKSI  300
VVLGNLFTVD QYGESSKQSS SQSGSPQGTL QLAASSRGTS MTGSDSMEED GDDRSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	4e-48	G2-like family protein