PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019165455.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 271aa MW: 29591.1 Da PI: 6.6596

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019165455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.4	3.5e-09	86	136	2	51
XXXCHHHCHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqk.NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +++k ++++ + NReA r++R++Kka+ + Le++v L + N++L k+l+ XP_019165455.1 86 SADKIAKKRPSgNREAVRKYREKKKARAASLEDEVVRLRTINQQLLKRLQG 136 567777777666**********************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MDDGELEFSN QEMLSSPPCI GEFPDTSSMG SFWNDILSDT HACTHTHTCN PPGPDNSHTH 60 TCYHVHTKIV PAPSEDKAPS DDTAESADKI AKKRPSGNRE AVRKYREKKK ARAASLEDEV 120 VRLRTINQQL LKRLQGQAVL EAEIARLKCL LVDIRGRIEG EIGSFPYQKP VKSGDLYPNL 180 ANPTLPGAYI MNPCNMHCND QVYCLHHGSE GKSSEGATLN NQGTSNCEFE SLQCFGNQTS 240 GLKELPGCGV GSNMSTRNAK KKVVAQASES S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16770.1	2e-92	bZIP family protein