PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019165604.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 172aa MW: 19234.3 Da PI: 5.7036

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019165604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.2	7.4e-13	30	88	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+++NRe+ArrsR RK++ ++ L v +L +eN + ++ ++++ ++++++ XP_019165604.1 30 RKRKRMISNRESARRSRMRKQKHLDDLMAQVSQLRKENNQIVTAMNATTQQYLNVEAHN 88 6789************************************9999999999988877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MASSGVTSPG SSVLQSSGSE EDLQTLMDQR KRKRMISNRE SARRSRMRKQ KHLDDLMAQV 60 SQLRKENNQI VTAMNATTQQ YLNVEAHNSI LRAQVAELSH RLEALNEIVS FLNANNGGFA 120 AALEEEEQPN YSCYGNLESP ADAFFATNNN SWNFLYSNQP IITSASADIL QY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	51	RKRKRMISNRESARRSRMRKQK
2	43	50	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	8e-41	bZIP family protein