PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165805.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 90aa    MW: 10353.8 Da    PI: 9.7145
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165805.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.71.3e-08753144
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     r +WT+   +l+ +a + + ++   +W  +ar +g g+++ ++k ++
   XP_019165805.1  7 RSSWTPRQNKLFEKALATFDKDtpdRWQNVARAVGGGKSADDVKRHY 53
                     789*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MASSSFRSSW TPRQNKLFEK ALATFDKDTP DRWQNVARAV GGGKSADDVK RHYEILLEDL  60
RRIECGDVPL PAYKTTAVDE QRLLRFLKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.14e-32MYB_related family protein