PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165809.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family DBB
Protein Properties Length: 200aa    MW: 22285.8 Da    PI: 6.6116
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165809.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box24.55.6e-08433534
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                     C+ +e++e+++fC+ ++  lCe C  + H
  XP_019165809.1  4 QCDVCEKEEASIFCTADEAALCEACNHHVH 33
                    7************************99998 PP
2zf-B_box25.33.1e-085492238
        zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38
                    + + C+ ++e ++  fC++++  lC++C +++H+   Ht
  XP_019165809.1 54 QYPHCDICQERRAFVFCKEDRAILCRECDSQIHRTnqHT 92
                    6799*****************************768876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MKIQCDVCEK EEASIFCTAD EAALCEACNH HVHDANKLAG KHLRFPLLRP PLKQYPHCDI  60
CQERRAFVFC KEDRAILCRE CDSQIHRTNQ HTQKHSRFLL TGVTLSTTAA SYQSCSSSPS  120
ASASNVVGYH ANHHRTPEIN SSPTSDHISW PNSNMTEPKP TTSPEGSLSD TSSISEYLTQ  180
TLPGWHVEDF LDHLSSGFCT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75540.13e-58DBB family protein