PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019165810.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 502aa MW: 55511.2 Da PI: 7.1272

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019165810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.7	1.1e-12	204	236	2	34
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeek 34 + +k rr+++NReAArrsR+RKka+i++Lee XP_019165810.1 204 RHWKTLRRLAQNREAARRSRLRKKAYIQQLEES 236 789****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MMGSENNING NDDNKLLLGV GVPFMAAASG SKTNQVSVAQ PPPFQDPAAL NNHTFLATMQ 60 LPSSSPPPGN SMNKDNNGAY DLGELDQEFL LFLGDAQAQD PSSSSHDQRR RAENYDGMRP 120 PNTLNIFPSQ PMHVNPSSTA EAIAGLVVSP DTPEASNRPS LPLMELSNLK NKAVVASASA 180 SDPPKPLKLE ASGSRRGSTS SGDRHWKTLR RLAQNREAAR RSRLRKKAYI QQLEESRITL 240 IQLEQQVARA IARGVRISEN GSIVGAQHGH PLSMTKITPE AAAFEMEYGR WVEEQHGMIC 300 ELRNAVIDEH ASEIDLKRYV DACFAHYAKM THLKSTLAKS DVLYLVSGMC WTPVERCFIW 360 IAGFRPSQLL KVIMRQLELV TEQQVLGMIA LQQSTQEAEE ALSQGMEALN QTISDIISSD 420 NALFYPSNLG TCMGQMAAAI TNLCTLETFV RQADHLRTQT LQRLYQILTI RQVATCFLII 480 ADYFHRLRAL SSLWLGRPRL DI

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MMGSENNING NDDNKLLLGV GVPFMAAASG SKTNQVSVAQ PPPFQDPAAL NNHTFLATMQ  60
LPSSSPPPGN SMNKDNNGAY DLGELDQEFL LFLGDAQAQD PSSSSHDQRR RAENYDGMRP  120
PNTLNIFPSQ PMHVNPSSTA EAIAGLVVSP DTPEASNRPS LPLMELSNLK NKAVVASASA  180
SDPPKPLKLE ASGSRRGSTS SGDRHWKTLR RLAQNREAAR RSRLRKKAYI QQLEESRITL  240
IQLEQQVARA IARGVRISEN GSIVGAQHGH PLSMTKITPE AAAFEMEYGR WVEEQHGMIC  300
ELRNAVIDEH ASEIDLKRYV DACFAHYAKM THLKSTLAKS DVLYLVSGMC WTPVERCFIW  360
IAGFRPSQLL KVIMRQLELV TEQQVLGMIA LQQSTQEAEE ALSQGMEALN QTISDIISSD  420
NALFYPSNLG TCMGQMAAAI TNLCTLETFV RQADHLRTQT LQRLYQILTI RQVATCFLII  480
ADYFHRLRAL SSLWLGRPRL DI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	226	RRSRLRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	1e-129	bZIP family protein