PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165820.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 88aa    MW: 9800.08 Da    PI: 7.6075
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.83.2e-101462247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     g+W++e  + + +a + + ++   +W+ +a+ +g g+t++++k ++q +
   XP_019165820.1 14 GSWSAEQNKEFEKALAVYDKDipdRWSNVAKAVGGGKTAEDVKIHYQLL 62
                     79********************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MASNNAMPSR HGCGSWSAEQ NKEFEKALAV YDKDIPDRWS NVAKAVGGGK TAEDVKIHYQ  60
LLVRDVIYIE RGLVPFPADH QTTAWKLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.23e-28MYB_related family protein