PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165863.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family FAR1
Protein Properties Length: 252aa    MW: 28623.9 Da    PI: 6.8669
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165863.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.42.1e-2788175291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+YA++vGF +r+sk ++s+++g+ + r +vC+keg+r  ++++  k  r+raetr+gC+a++ v+k ++gkw+vtk ++eH+H+l+p
  XP_019165863.1  88 FYNAYATRVGFIIRVSKLSRSRKDGTAIGRALVCNKEGFRMADRRE--KVVRQRAETRVGCRAMILVRKVSSGKWVVTKSVKEHTHPLTP 175
                     ******************************************9988..999************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MDFEIDGDLN GEVVGSSVIE VRADAENAIE GGSPDEHDFH QAPNVKVDHD LSGRDVVSIE  60
EPETVSNSAP DEPYVGQEFE SEAAAHAFYN AYATRVGFII RVSKLSRSRK DGTAIGRALV  120
CNKEGFRMAD RREKVVRQRA ETRVGCRAMI LVRKVSSGKW VVTKSVKEHT HPLTPGKGRR  180
ESIYDQFPNE HDKIRELSQQ LAAEKKRSAT YKRHLEMIFE HIEEHNQSLS KKIQDIVNNV  240
REMESRDQQN RR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-94FAR1 family protein