PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019166152.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Protein Properties

Length: 434aa MW: 48840.1 Da PI: 5.0639

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019166152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.4	2.9e-14	117	204	1	96
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k l++s+v+ +l lp +f++ + + + + t+ le + +++e k+i ++++ l++GW++F a++L+egD vF+l+++ +f +v XP_019166152.1 117 FIKLLSRSHVTHGFWLGLPADFCRMYL-P-PHDHTIPLEGDNEKQYEAKFIAERQG----LSGGWRGFSLAHNLQEGDAAVFHLVQQYKF--KVY 203 89*******************9994.3.35569***********655555....9*********************997666..444 PP E CS B3 96 v 96 XP_019166152.1 204 T 204 4 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MAGVSVVPTM ASEPVSMIEH NSEEPLIKQV KPEKNLEQEE GIDDQLTLSQ YFMNKSSSSV 60 SPSMGTPLVG EASATTNRKR ARVMIKDRCK KSATHSSPTM QKAKAFQASL DPTQPSFIKL 120 LSRSHVTHGF WLGLPADFCR MYLPPHDHTI PLEGDNEKQY EAKFIAERQG LSGGWRGFSL 180 AHNLQEGDAA VFHLVQQYKF KVYTVRAVHE RSYLEENCQN DGQPETNYEL GDEGFIFEND 240 KEDSPAETKD GSSTGSFVDL KKFSIVVNEC PMDSKFSISA RQKYYELCCA QKSYLHDGFA 300 ENINYTLAVG IILETVSIAD NIKACTLSTP LTDFKSWDNT LSGFMHLGMD VGFLQERLSK 360 LSTRAIEFQG SHEASRHCEI ITEENNLNKE IESVERKLME LKEALMDVQV EKEALETQFL 420 IYDMVFCGMA KSPW

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MAGVSVVPTM ASEPVSMIEH NSEEPLIKQV KPEKNLEQEE GIDDQLTLSQ YFMNKSSSSV  60
SPSMGTPLVG EASATTNRKR ARVMIKDRCK KSATHSSPTM QKAKAFQASL DPTQPSFIKL  120
LSRSHVTHGF WLGLPADFCR MYLPPHDHTI PLEGDNEKQY EAKFIAERQG LSGGWRGFSL  180
AHNLQEGDAA VFHLVQQYKF KVYTVRAVHE RSYLEENCQN DGQPETNYEL GDEGFIFEND  240
KEDSPAETKD GSSTGSFVDL KKFSIVVNEC PMDSKFSISA RQKYYELCCA QKSYLHDGFA  300
ENINYTLAVG IILETVSIAD NIKACTLSTP LTDFKSWDNT LSGFMHLGMD VGFLQERLSK  360
LSTRAIEFQG SHEASRHCEI ITEENNLNKE IESVERKLME LKEALMDVQV EKEALETQFL  420
IYDMVFCGMA KSPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	3e-32	B3 family protein