PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019166442.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 253aa    MW: 28321.9 Da    PI: 5.4274
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019166442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.32.3e-1274120354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h e+ErrRR+riNs ++ Lr+llP +      + +Ka+ L k+ve +++L
  XP_019166442.1  74 KNHREAERRRRERINSHLDCLRTLLPCN-----SRTDKASLLAKVVERVREL 120
                     78*************************8.....69************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MQPDNTPEIF DYYYNNNYYS LSGNAASSYG LPATYEIPPP SNHESFCSSA FYHTELPETV  60
SDCTPEARAL AASKNHREAE RRRRERINSH LDCLRTLLPC NSRTDKASLL AKVVERVREL  120
KEEASELMEI ETGIPSESDE ITLLLSSDDE CSGDGRLVIK ASLCCEDRMD LIPDLIHTLK  180
SLRLSPLRAE MVTLGGRIRN VFILAGDLKD HACADESSIL FLRNALKSVV ERSACGAGER  240
SKRRRMIDHG VIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18085ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.17e-44bHLH family protein