PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019166445.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

DBB

Protein Properties

Length: 231aa MW: 25415.8 Da PI: 4.7704

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019166445.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.8	1.7e-06	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ ++ C ++ lC +C e H H++ XP_019166445.1 4 QCDVCEKASATVICCADEAALCTQCDIEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	27.2	8e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + + C+ ++ek + +fC +++ l+C++C + +H+ H XP_019166445.1 53 KLPPCDICQEKAAFIFCVEDRALFCKECDEPIHSAnslaanH 94 6789*****************************655666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MKIQCDVCEK ASATVICCAD EAALCTQCDI EVHAANKLAS KHQRLLLQCL SNKLPPCDIC 60 QEKAAFIFCV EDRALFCKEC DEPIHSANSL AANHQRFLAT GIRVALSSSC KKDAPNAQLE 120 PQPPKPNSQQ VTVKTPSQQL SGITSPSWAV DDLLGFSDYE SSEKKEQLEL GELEWLNDIG 180 LFGEHEVPEL SVAPQPSHAS MNKSAKFYMP HKKARIDVPD DDEFFTVPDL G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31380.1	7e-77	DBB family protein