PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019166555.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family FAR1
Protein Properties Length: 121aa    MW: 13677.2 Da    PI: 4.4579
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019166555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.26.2e-0978119243
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkree 43 
                     +Y +YAk  G  +rks+  ks++n+ ++ ++fvCsk+g+r++
  XP_019166555.1  78 CYTNYAKYEGLGIRKSRIVKSRKNQMVIGQEFVCSKQGYRAK 119
                     69*************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MATFHDKDHN IVEIEDHGCE ITTELSESNH DELVNNGEFN IGEIEQNANA DAKSDVNNDA  60
IELCIGMEFQ SLDDALMCYT NYAKYEGLGI RKSRIVKSRK NQMVIGQEFV CSKQGYRAKN  120
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.27e-09FAR1 family protein