PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019167026.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 447aa    MW: 50388.8 Da    PI: 4.4461
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019167026.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.72.7e-08191239247
                      SSS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+eE+el+ ++v    + lG++ W+  a +++ +Rt+ +++s+++++
   XP_019167026.1 191 QKWTEEEQELFHEVVssspASLGKNFWHHLAVEFP-HRTRREIVSYYFNV 239
                      79*************3333357777**********.***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    
MGFPGSASHS SWATSSTSEE DVRSEGPHNT SFSPEYYNHD IPFRTVTHSK ELYSYLLRNP  60
PSKLVPVGPD FQAEIPECGG CGNKEKANSS KDACKTIDHS YESLESNCGG QFDYENRLAG  120
TCIVPNSKSE SAAYSSEAVA SGRSDCCCED TGSVRCIQQH IIEAREKLKT LLGEETFVKL  180
GFYDMGEVVA QKWTEEEQEL FHEVVSSSPA SLGKNFWHHL AVEFPHRTRR EIVSYYFNVF  240
MLRIRAEQNR LDPLNIDSDN DEWQEEAYDS AGEEEAKMTD EDEDSVVESP VHHDDPGHIL  300
IYDDYKHPYY EDAGLAIWRD YKHLGHDTNK VVTTVPEECG DKLFEKHSSE LTVQHPDRSE  360
PNEANHAELD GPSTRADNKH WTSDYVGTGN SNGHEFVLEP RFGREWDVGY SSCTKNDVDF  420
LPTCSMIEEV FGNEACYDKS RDGYGSS