PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019167225.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YB
Protein Properties Length: 158aa    MW: 17774.1 Da    PI: 4.3972
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019167225.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB75.11.1e-231199391
           NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91
                    ++d+ lP a +++i+k++lP + ++++d+++++ ec +efi +++se+++ c+re+++ti+++ +l al  lGf dy+e++ +  +++r
  XP_019167225.1 11 KEDASLPKATMTKIIKEMLPPDVRVARDCQDLLIECCVEFINLISSESNEVCNREDKRTIAPEHVLKALDVLGFGDYIEEVYAAYEQHR 99
                    6899***************************************************************************9987666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MEPMDIVGRT KEDASLPKAT MTKIIKEMLP PDVRVARDCQ DLLIECCVEF INLISSESNE  60
VCNREDKRTI APEHVLKALD VLGFGDYIEE VYAAYEQHRL ETMDSVRAGK LSNGAEMTEE  120
EALAAQQRMF AEARARMNNG ITVPKQPNTE PEQQNTNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.48e-92NF-YB family protein