PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019167498.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 169aa    MW: 18960.3 Da    PI: 8.3819
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019167498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer96.42.2e-30559357
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                    +  YkeCl+NhAaslG++a+DGCgEf+p++++ g aa+l+CaACgCHRnFHR+  
  XP_019167498.1  5 NELYKECLRNHAASLGSYATDGCGEFTPDDTSPGGAASLQCAACGCHRNFHRKVA 59
                    568**************************8888*******************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MDNTNELYKE CLRNHAASLG SYATDGCGEF TPDDTSPGGA ASLQCAACGC HRNFHRKVAY  60
GRGRAVVEDH DMMMTTTTTP TPPPPEMIES PERSGKKRFR TKFTAEQKEK MLAFAEKLGW  120
KLQRKEEEDE IERFCRGVGV SRKVFKVWMH NHKNNNSSTP SANVSSLTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-41ZF-HD family protein