PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019167702.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 353aa    MW: 39637.3 Da    PI: 8.6822
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019167702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.63.5e-06223264955
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      r RR++  +++  L++l+P+      +K++   +Le+A +Y+k Lq
  XP_019167702.1 223 ARERRQKQCEKIRYLQKLMPWE-----TKMDTTKMLEEAHKYVKFLQ 264
                     599******************9.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MSSSLLFYGD EQAFPVDDEA YIINGMHDKL SFRALLSLCL NHDEQTGLSH LLPPQLISTA  60
ATSNFNSLPY DVYPPMPENV AFGSFSAFPP TLIRSLQCGD LELKFSKMPR QDFSTHHFGS  120
YGYGGYGYNN SAAVSTEPSN CFADDGVSCD YGFRHLPDLR SLEKQQPLPL NTEEFGFRPP  180
RNIGGYILDK ATGNYQPPAT RRHPHREPRK AAAKTESRSC KLARERRQKQ CEKIRYLQKL  240
MPWETKMDTT KMLEEAHKYV KFLQAQVRVL QTMPVRGALP SPNTTPALHG TLAKLSRQQL  300
LEALVNSPAA QTFLYSRGCC VYSVEQLALL GKVVDRKALF EQMLIASASM LRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.14e-26bHLH family protein