PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019167839.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family FAR1
Protein Properties Length: 355aa    MW: 40715.4 Da    PI: 9.3595
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019167839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.11.2e-17291690
            FAR1  6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                    YA+++GF+vr+s+ kk+ + g + k++ vCs++g++e++ k+       ++++++++++r+gC a++++k  + ++ +v+k+e+ H+H l+
  XP_019167839.1  2 YATTTGFDVRRSSDKKN-NFGIVLKKDVVCSRQGFKETRGKEtlgeggGSEKKQRQTTNRVGCGARIVMKIVSAERHRVHKFEERHTHCLC 91
                    ************99988.8888*******************99****98889999999******************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MYATTTGFDV RRSSDKKNNF GIVLKKDVVC SRQGFKETRG KETLGEGGGS EKKQRQTTNR  60
VGCGARIVMK IVSAERHRVH KFEERHTHCL CEESHKPFMK VNRKLEIAHQ EFITKCEKAN  120
VGASKSFDIY AEIVGGPENI GATQQDFKNY RRELLAYMKW GDVQMVISNY LEQKTDCADM  180
YFEYEVNAND QLARVFWADG MARKNYGAFG DVVSFDATYK TNRYHLVFVP FTGVDNHKRC  240
VTFAATLIDK EDVESYSWVV KHFKNAMGTA PPIVITDQDP AMKIGIANVF GGSRHRYCMW  300
HIMTKVSEKV GAEMSKNNEF RRALNSVAWN EKAMRSEFEI GWKTVIGKYN LHENR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-51FAR1 family protein