PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019167853.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 243aa MW: 27204.4 Da PI: 7.2646

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019167853.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	91.9	5.2e-29	33	88	6	61
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++cprC+s+ntkf y+nnys++qPry+C++C+r+Wt+GGa ++P+Gg + k k+s XP_019167853.1 33 RECPRCQSNNTKFSYFNNYSVNQPRYYCRTCKRHWTHGGAQHDIPIGGKSHKGKRS 88 68************************************************999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MEQSRGLGDY NQSFPPGRRS RVVDYHGTPL PPRECPRCQS NNTKFSYFNN YSVNQPRYYC 60 RTCKRHWTHG GAQHDIPIGG KSHKGKRSTR RHENQRVQLA PPSPPQLQPL SPSAIVAPPA 120 SISPMVPPMM TPYHASGGFF PLMVEEEIAQ PHKFEAENGY LNWVNPLNIV DQTFLQLTTM 180 NSDSCMENFH LKNSEASSSN VVPLDASVGK ISTTNEGTNV SWDSSFVDVD EWLNIPSDFS 240 PSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21050.1	4e-23	Dof family protein