PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019168235.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family FAR1
Protein Properties Length: 173aa    MW: 20022 Da    PI: 9.2094
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019168235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.81.8e-13381082690
            FAR1  26 geitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                      +i +++ vCs++g++e++ k+       ++++r+r+++r+gC a++++k   d +++v+k+e+ H+H l+
  XP_019168235.1  38 IKIDTQDVVCSRQGFKETRGKEtlgeggGSEKKRRRTTNRVGCGARIVMKIVGDRRYKVHKFEERHTHCLC 108
                     46778999*************99****989999999********************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MAYVNLILGD KHDNEKEIHL NYDMQFIPME ILSMDKRIKI DTQDVVCSRQ GFKETRGKET  60
LGEGGGSEKK RRRTTNRVGC GARIVMKIVG DRRYKVHKFE ERHTHCLCEE SHKPFMKVNR  120
KLEIAHQEFI TKCEKANIGA SKSFDIYAEM VGGPENVGAT QQDFKNYRRE LLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-08FAR1 family protein