PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019168492.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 174aa    MW: 19350.8 Da    PI: 9.9531
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019168492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-202776255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrd +     + +r +lg+f+taeeAa+a+++a+++l+g
  XP_019168492.1 27 HFRGVRKRP-WGRYAAEIRDpW-----TkTRRWLGTFDTAEEAARAYDEAARSLRG 76
                    69*******.**********88.....44999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MVAGNTTERG TVQGVSPAGR SAKESHHFRG VRKRPWGRYA AEIRDPWTKT RRWLGTFDTA  60
EEAARAYDEA ARSLRGTKAK TNFDLDGLSC FSPVHAEPAP IVPDFSSATT VPQWLPPPWF  120
PSAAEDTPPR SEYTGYKLET VVGVVTSERE KQLRTEKKVK KPLSFDLNSP PPLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-21ERF family protein