PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019168584.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 229aa    MW: 24702.5 Da    PI: 10.2494
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019168584.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.1e-192171256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +g+++AeIrdp     r +r++lg+f taeeAa+a+++a+++++g+
  XP_019168584.1 21 RYRGVRKRP-WGKYAAEIRDPA----RrTRVWLGTFETAEEAARAYDKAAREFRGA 71
                    69*******.**********82....35*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MAPKKAAARR VNPAEQNEEV RYRGVRKRPW GKYAAEIRDP ARRTRVWLGT FETAEEAARA  60
YDKAAREFRG AKAKTNFAPP LGDHQFPLGN FGKKNNSHNQ SPSHSSTVES SGRDGGIFSP  120
TPPDLALRGP AAITAGWFPS MNYHPPSGSP IFPVGYNPPA VNLSGQMFYL DALARGGTAN  180
PPPNRQLETV DFLGGAGTPT ESDSSSIINN QPKKGGLNLD LNLPPPENS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.13e-23ERF family protein