PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019168601.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 378aa    MW: 41526.1 Da    PI: 5.0402
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019168601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.19.8e-062673041254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_019168601.1 267 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 304
                     677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MADEFSTAAV CGGGWWNPTR NMFGSYLCSA SMNDIGSFVA WPPSHHDGEV TAEVNGRPPS  60
TDHSPTATAA ATDDWNQVLM QDNERGDRSY GSMLQEDLNY GVQETLTVIP SSSQELSTSF  120
PITSYNNYPP NLLKSMFDAD PHQPHQQCLI SSQPVISYAP ATTAAMTNYG PNLSDFSPSP  180
PKFSSLLSPT NHHLQFPSSI SLWDSSLTSC SFPSPTFTDK KPAITAKLNG SNNKELRDSS  240
CVANKTKPDF KRPRIETPSP LPTFKVRKEK LGDRITALQQ LVSPFGKTDT ASVLHEAIEY  300
IKFLHDQVNV LITPYMKNGS PSDQHSQQNT EEVLDEEGLS KQDLRSQGLC LVPMSSTFPV  360
AAETTTDFWT PTFGANFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.19e-53bHLH family protein