PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019168704.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 283aa    MW: 29485.7 Da    PI: 8.62
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019168704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-203080256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a+++a+++++g+
  XP_019168704.1 30 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDNAAREFRGA 80
                    6********.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MAPKDKGAAV AVAVPAVDCN VNGVRKEQVH YRGVRKRPWG RYAAEIRDPG KKSRVWLGTF  60
DTAEEAARAY DNAAREFRGA KAKTNFPLAE ERIPLDFCAR FDMNRNACEK DGGGCGGGGG  120
GGGGRNSNHH SPSQSSTVES SSRDGGGRFS PAVLVDSSSL LDLNVGGGGG FSAVNLPYQS  180
RHLRVAPVVV SGYPPAAAAA VHPASHVFYF NALARAGAIS PSLNPRFSSP NFHDGGGAGS  240
TGSGVAQSES DSSSVVETNR DLKPNKDGLI LDLDLNLPPP ETL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-25ERF family protein