PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019168725.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 290aa    MW: 31965 Da    PI: 9.2143
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019168725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.4e-18108158256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg++ tae Aa a+++a+ kl+ge
  XP_019168725.1 108 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYETAEAAAYAYDRAAYKLRGE 158
                     59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MESIHGSNMP FVYGKNSEIG PSLSQLILTG GANTMDSIFS GYPEPAANHN SAASEPLGSS  60
VYLLHREILQ KFWQENRVTT PALFTTTRAP GAFNDGLSAY MNPMKKKLYR GVRQRHWGKW  120
VAEIRLPQNR MRVWLGTYET AEAAAYAYDR AAYKLRGEYA RLNFPNLRDP SKLGFGDDAK  180
LAELKKAVDA KIHAISQKVK RESKAKESKK RNAKQSSAQT VGTIESPSSP FAGNQVSEEE  240
FCSCKSKAST TSSDSGGIPA LPSIDSDFDD CSLARIPSFD LDLIWEVLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.16e-52ERF family protein