PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019168727.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 344aa    MW: 37825.6 Da    PI: 5.6387
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019168727.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-19120169255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  XP_019168727.1 120 KYRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDHAAIRLRG 169
                     8********.**********72....45*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MLSSTVKYSE HRHQVSMVRS LPSGRRNLPE IGGGGWPRVV RISVTDGDAT DSSDEDEEKG  60
RRRVKRYVTE LRILPCGRGD GNGDSDGVLK TEGTAAAAAA KRRKKSAESR LKAAGNNARK  120
YRGVRQRPWG KWAAEIRDPL RRVRLWLGTY DTAEEAAMVY DHAAIRLRGP DALTNFSVPT  180
TAPPDVKPEP ADSGNNSGDD SHHQLSPKSV LRFASASNGD SPHQDQAVKM YHTPSSPENL  240
STFSSPENHS TFSSPENLST FSSQFDTLFP NDFFQFEDPL SVPVPVPGLF DEMGLSNYIF  300
EEACSDNTFI GSSHEFGSEQ PAWPADNYFQ EFGDIFGSDP LVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.11e-49ERF family protein