PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019168753.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 306aa MW: 34127.1 Da PI: 4.9847

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019168753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.9	2.1e-28	142	200	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 dD+++WrKYGqK++kgs++prsYYrC+s gC ++k+vers ++ ++++tY+ eH h+ XP_019168753.1 142 DDKWAWRKYGQKPIKGSPYPRSYYRCSSLkGCLARKQVERSCSEAGMFIVTYTAEHCHS 200 8************************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MMMAQCAGGD GALQAVVHGS SNRDSAASGG ASFGAFDGRV SPDEDFGLFE DVFGTEMTRI 60 WNGDELEELY KPFYHPFCAS SPVCFPKEVN QQPAVELQDD YQKPPPDAPP AAAAAVYVPK 120 YKRRKSEHKR VVLQVPLEEL SDDKWAWRKY GQKPIKGSPY PRSYYRCSSL KGCLARKQVE 180 RSCSEAGMFI VTYTAEHCHS QPTRRNSLAG TIRNKFPTAA ASSKKPQDYY YSEDGLQDHP 240 PASFMSPAVV SPAMVKEEEK MVDENEYNNN INVKYDVEDD FFAGLDDLDG LISHFSSPCD 300 QSFLYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01250.1	1e-31	WRKY family protein