PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019168755.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 234aa    MW: 26300.6 Da    PI: 8.2541
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019168755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.4e-1859107254
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54 
                     +++GVr+++ +g+Wv+eIr+p        +r++lg++ tae+Aa+a+++a++ + 
  XP_019168755.1  59 RFRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTYETAEDAARAYDEAARLMC 107
                     69******9.**********8.....334**********************8775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MLTKTPELFT PISSSYSAHH TFSPTLPLLL PSLRHFHKHL QHHCRVSRSL SAMARPQQRF  60
RGVRQRHWGS WVSEIRHPLL KTRIWLGTYE TAEDAARAYD EAARLMCGQM ARTNFPYNAG  120
DHQSSSSSRK FLSANLIAKL QRCQMTSHSV AKRPTAQARA PEQEYPPPAV SRGDGAPANN  180
LAQSGAETVE NWVGCQGQEG SGQEFKALED HHIEQMIEEL LDYGSIELCS VLQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.18e-51ERF family protein